Search Unigenes:
Smed Unigene SMU15036138 : Putative PROTEIN EYES SHUT OS=DROSOPHILA MELANOGASTER GN=EYS PE=1 SV=1

SMU15036138 is represented by 3 transcripts from 3 libraries.


Smed Unigenes are generated by clustering all available transcripts to generate a model, or Smed Unigene, representing all similar transcripts. The Smed Unigene may not accurately reflect each transcript due to biological processes such as alternative splicing.

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with ENSEMBL and SWISPROT proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms SpeciesSpecies or DBE-value
FBpp0303537eyes shutH.sapiens4e-40
ENSP00000256646notch 2H.sapiens4e-36
ENSP00000256646notch 2H.sapiens3e-33
F47C12.2Caenorhabditis elegans Protein F47C12.1 (F47C12.1) mRNA, complete cds.H.sapiens5e-33
F47C12.2Caenorhabditis elegans Protein F47C12.1 (F47C12.1) mRNA, complete cds.H.sapiens3e-31
EYS_DROMEProtein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1Swissprot3e-39
EYS_DROMEProtein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1Swissprot6e-25
EYS_DROMEProtein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1Swissprot6e-22
EYS_DROMEProtein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1Swissprot3e-17
EYS_DROMEProtein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1Swissprot4e-09
XP_005168706.1PREDICTED: neurogenic locus notch homolog protein 1 isoform X1 [Danio rerio]NCBI-nr2e-37
XP_005168706.1PREDICTED: neurogenic locus notch homolog protein 1 isoform X1 [Danio rerio]NCBI-nr6e-30
XP_005168706.1PREDICTED: neurogenic locus notch homolog protein 1 isoform X1 [Danio rerio]NCBI-nr3e-27
XP_005168706.1PREDICTED: neurogenic locus notch homolog protein 1 isoform X1 [Danio rerio]NCBI-nr1e-26
XP_005168706.1PREDICTED: neurogenic locus notch homolog protein 1 isoform X1 [Danio rerio]NCBI-nr3e-23
SELECTED MOTIF SIMILARITIES
Comparison of cluster transcripts with INTERPRO. The alignments can suggest function of the cluster.

Identified MotifsDatabaseMax Score
PF00008.22|EGF|EGF-like domainPFAM2.5e-21
PF07974.8|EGF_2|EGF-like domainPFAM2.6e-10
PF12947.2|EGF_3|EGF domainPFAM0.00048
TRANSCRIPTS
Amino acid translations of transcipts were clustered and used to generate a Smed Unigene. These transcripts are those that were clustered as well as other transcripts and sequences that have homology to the transcripts of the unigene cluster.

Transcript IDView Assembly AlignmentsTranscript Collection
comp75181_c0_seq1
SXLWT
c89796_g1_i1
SXLREGEN
Contig7204
PN
Associated Gene Ontology Terms
Gene Ontology terms are derived from the unigene transcript cluster compared to InterPro proteins. The GO terms can suggest function of the cluster.

GO:0000902
Name cell morphogenesis
Ontology Biological process
Synonymn
  • alt_id: GO:0007148
  • alt_id: GO:0045790
  • alt_id: GO:0045791
  • exact: cellular morphogenesis
Definition The developmental process in which the size or shape of a cell is generated and organized.

GO:0005201
Name extracellular matrix structural constituent
Ontology Molecular function
Synonymn
  • narrow: extracellular matrix glycoprotein
Definition The action of a molecule that contributes to the structural integrity of the extracellular matrix.

GO:0005509
Name calcium ion binding
Ontology Molecular function
Synonymn
  • related: calcium ion storage activity
Definition Interacting selectively and non-covalently with calcium ions (Ca2+).

GO:0005576
Name extracellular region
Ontology Cellular component
Synonymn
  • exact: extracellular
Definition The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

GO:0005615
Name extracellular space
Ontology Cellular component
Synonymn
  • related: intercellular space
Definition That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

GO:0009986
Name cell surface
Ontology Cellular component
Synonymn
  • alt_id: GO:0009928
  • alt_id: GO:0009929
  • exact: cell associated
  • exact: cell bound
Definition The external part of the cell wall and/or plasma membrane.

GO:0010378
Name temperature compensation of the circadian clock
Ontology Biological process
Synonymn
  • related: regulation of the circadian clock by temperature
Definition The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.

GO:0016021
Name integral to membrane
Ontology Cellular component
Synonymn
  • related: transmembrane
Definition Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

GO:0031513
Name nonmotile primary cilium
Ontology Cellular component
Synonymn
  • exact: immotile primary cilium
  • exact: nonmotile primary cilia
  • exact: sensory cilium
Definition A primary cilium which contains a variable array of axonemal microtubules but does not contain molecular motors. Nonmotile primary cilia are found on many different cell types and function as sensory organelles that concentrate and organize sensory signaling molecules.

GO:0042052
Name rhabdomere development
Ontology Biological process
Synonymn
  • exact: rhabdomere organization
Definition The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.